rs50086347 SNP Detail

Summary

• ID
  rs50086347
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:156193994 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTTT TTGAGACAGG GTTTCTCTAT
  G
  TAGCCCTGGC ACTCACTTTG TAGAC                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss148126455	ENSMUSSNP6889497	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs50086347					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:156193994 () rs orientation: forward

Symbol	Name	Function Class
9430015G10Rik	RIKEN cDNA 9430015G10 gene	461 bp upstream
Cpgi15500	CpG island 15500	92 bp proximal
Gm69135	predicted gene, 69135	within coordinates
Rr398931	regulatory region 398931	203 bp upstream
Tssr40790	transcription start site region 40790	434 bp upstream
Tssr40791	transcription start site region 40791	476 bp upstream