rs50086566 SNP Detail

Summary

• ID
  rs50086566
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:21846239 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTGC CTCCCATGCT GGGATTAAAG
  K
  TGTACACCAC CACACACATC TTTTT                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss139200326	ENSMUSSNP6053869	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	T
ss324566585	CHEV_14_22615393	CHEVERUD	SCREENING_POP	f	SNP				G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs50086566					SNP	G	G	T	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:21846239 () rs orientation: forward

Symbol	Name	Function Class
Samd8	sterile alpha motif domain containing 8	within coordinates
Tssr124451	transcription start site region 124451	1623 bp upstream
Tssr124452	transcription start site region 124452	1638 bp upstream
Tssr124453	transcription start site region 124453	1802 bp upstream