rs50098248 SNP Detail

Summary

• ID
  rs50098248
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:52282734 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCCAG TTACAGTTGC AGCAATTACA
  W
  CGCCACAGCA TTACTCTTAT CTCCC                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss139499934	ENSMUSSNP2421651	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T
ss324626886	CHEV_14_52664952	CHEVERUD	SCREENING_POP	f	SNP			A	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs50098248					SNP	A	T	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:52282734 () rs orientation: forward

Symbol	Name	Function Class
Rr389655	regulatory region 389655	450 bp upstream
Rr491869	regulatory region 491869	within coordinates
Rr491870	regulatory region 491870	183 bp proximal