rs50105174 SNP Detail

Summary

• ID
  rs50105174
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:70413542 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACAAACAAGC AAACAAAAAA ACAAACAAAC AAACAAAAAC
  AAGTCAAAAG AAGCCTGGGA CATCCGTGAA CAACAGAGTG AAGCCTGGGA CATCCGTGAA
  M
  GACAGAGTGA AGCCTGGGAC ATTGTGAACG ACAGAGTGAA GCCTGGGACA TCGTGAACGA
  CAGAGTGCTT GCCTAACATT CCTGTACAAG GTTCTGGGT                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss132372240	ENSMUSSNP34355	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs50105174					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:70413542 () rs orientation: forward

Symbol	Name	Function Class
Gltpd2	glycolipid transfer protein domain containing 2	1980 bp downstream
Rr450320	regulatory region 450320	653 bp proximal
Rr450321	regulatory region 450321	853 bp proximal