rs50106383 SNP Detail

Summary

• ID
  rs50106383
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:116590439 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTCTCCCGT CTTTGCCTTT
  CTAGTTCTGG AACTCTGGGA CTATAAGCAA GAGCTACCAT ACCATAATTT TTTTTCTTCA
  ATTCCATTTT TCCATGAGCC ATCTCTTTGG TGCTATAATT GAAAATCTAA TTGTACAATT
  CTTTGATGGT CTCTGCATGG AAATCCTACA GATAAACCCT TACTCTTTCT TGTTTTCTGA
  Y
  ACACACACAC ATGTGTATAC ATATACATAT ATGTATATTT GAGCAAAGTA TATCTTGCAG
  AAACATGTGT TGAATAAATA AATACATATG AGGGATAGGA ACAGGTTGTC ATCCGATGCA
  CCACATTTGC TCCTATAAGG GAAGGAAGAC AGATGGGTCA AGGACACAAG AAAACCCACA
  GAACCAACTA ACTTGAGCTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss145742569	ENSMUSSNP1395312	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs50106383					SNP	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:116590439 () rs orientation: forward

Symbol	Name	Function Class
Rr159555	regulatory region 159555	1962 bp proximal
Rr381374	regulatory region 381374	within coordinates