rs50106567 SNP Detail

Summary

• ID
  rs50106567
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:78067102 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACACACAGA ATCAAGACTC
  AGGAGTGGTG GTTTAGCCTG TAACCCTAGT GTAGTACTCA AGTGGAGGCA GGAGTAATGC
  AAGTTTGAGG CCAGCCTGGG CTCCATAGCA AGTTCAAGTC CAGCTTGAAC TATAACAGGA
  TTCTAACTCA AAAGAAAAAA CAAAACAAAA CATGAAGAGG TTAGGAAAGT GAAGCCCTGG
  R
  CTCAATCCCC AGCACCACAA TCACAACAAT GAAACAGCCT TAAAGAGAAA GACCCATAAG
  CTAGGGGAGG CCACTGTTGA TCAGTCTGCA CTCCAGAACA GAGAGGCACT ACTGCTGGAG
  CACCTATTCA ATCACTCAAG CTCCTGAATT ACAGGACAAG TCCAGCCAAA ACACAGAGCC
  TGTACCTTCT CCATTCCATT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss147176900	ENSMUSSNP2287413	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs50106567					SNP	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:78067102 () rs orientation: forward

Symbol	Name	Function Class
D10Mit139	DNA segment, Chr 10, Massachusetts Institute of Technology 139	1392 bp proximal
D10Mit139.1	DNA segment, Chr 10, Massachusetts Institute of Technology 139.1	1506 bp proximal
Trappc10	trafficking protein particle complex 10	within coordinates