rs50110561 SNP Detail

Summary

• ID
  rs50110561
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:68830455 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTCTGTAGGA AAGGCATGGA TAAATTCTCC CCACTGTGGA
  TGGACATTCT AGACATATAA GAACTCTATC ACCACTTGCC AACACAGAGC CGTCACCTCA
  S
  CTCCTCACCT CTTGGCCTCA GATTGTTACT TATTTTATTG GCTTTAGAGG GGTTGGGTGC
  TAAGCTATCT GGTGTGGACC TGTTAGACAC ATTCCCCTA                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss139660921	ENSMUSSNP2538079	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs50110561					SNP	C	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:68830455 () rs orientation: forward

Symbol	Name	Function Class
Rr296117	regulatory region 296117	410 bp proximal
Tssr126359	transcription start site region 126359	1288 bp upstream