rs50119418 SNP Detail

Summary

• ID
  rs50119418
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:80818249 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACTTC ATCCTGACAT AAAATGCTAA
  R
  TAGGTAGGCT GTCGATGGTA GTTAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss135386111	ENSMUSSNP3842906	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
ss320812947	CHEV_3_80714864	CHEVERUD	SCREENING_POP	f	SNP			A	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs50119418					SNP	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:80818249 () rs orientation: forward

Symbol	Name	Function Class
Glrb	glycine receptor, beta subunit	within coordinates
Gm54207	predicted gene, 54207	1596 bp upstream
Rr578673	regulatory region 578673	1865 bp proximal