rs50125757 SNP Detail

Summary

• ID
  rs50125757
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:26757411 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCCAGGCTA AAAGGCTACG
  TCATCCCGTC ATCCTCTCTG CTGACGTCAC CACTTGCCCC ACCCTGCCCC TCCCATCCAC
  ATCACTGACT CCTAATCCAA GTTCAGCTTT AGGTGAGAAG AGCCAGGGAG CCACACTTTC
  TCTCCCCCAG GCTGCTTCTT TGGCTTTTGG CCTTTTCCTG TCCTATTTCA GACCCTCTGG
  T
  TCACTCCCAC AGAAGCTAAG CAAACGAACT GGAATCAGTG GGTCTGCGTC CCCCACCCCC
  GGGGGGGGGG CATTTGAATG TTAAGTTAAA CCAGGTTTTA TACTTTGGTG AAAGGAGCAA
  GGTGGTGAGA TTATCCAGTG ATCCCTGGAG CATTCTTTCC TGTGTGTAGT AGGAACTCTT
  AATAAACAGT GTCCTGTTAG                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ
ss145405441	ENSMUSSNP3010838	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ
rs50125757					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:26757411 () rs orientation: forward

Symbol	Name	Function Class
Gm50275	predicted gene, 50275	197 bp upstream
Rr405114	regulatory region 405114	87 bp downstream
Tssr143246	transcription start site region 143246	85 bp downstream