rs50126480 SNP Detail

Summary

• ID
  rs50126480
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:18759730 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTGCTGACAT TAAAATTGAT TCTTGATCAG AATTCAGTCT
  TGACTCCATT TCTCTCTTTA CCCGCCTATA TTCCCTCTTT TCTTCCAAAT TCCAAGAAGG
  C
  TTCCAGGCTC AAACCCGGAC ATGAGAGCCG CAGGCCAGCC CCAACAACTA TGTAGTGCTC
  CATTGTGTAA ATGTACCACA TTTTCTGTAT CCATTCTCC                       
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss145231566	ENSMUSSNP3296149	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs50126480					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:18759730 () rs orientation: forward

Symbol	Name	Function Class
Rr392375	regulatory region 392375	33 bp downstream