rs50129575 SNP Detail

Summary

• ID
  rs50129575
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:76023657 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAAGA GCAGTCGGGT GCTCTTACCC
  R
  CTGAGCCATC TCACCAGCCC CTGCC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss144640760	ENSMUSSNP1776003	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs50129575					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:76023657 () rs orientation: forward

Symbol	Name	Function Class
Rhobtb3	Rho-related BTB domain containing 3	within coordinates
Rr273737	regulatory region 273737	within coordinates
Rr277199	regulatory region 277199	256 bp distal
Rr277200	regulatory region 277200	within coordinates
Rr277201	regulatory region 277201	744 bp proximal
Rr277202	regulatory region 277202	1144 bp proximal