rs50137774 SNP Detail

Summary

• ID
  rs50137774
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:85848530 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGATCAATT TTTTTCTCTT
  ATGTTTCTTA ATCTGTAGTT ATTATCTAAT TGTAAGAACC CTTTCAAGGT ATGGAGAGAT
  GATAAAAATT GATGTCAGAA AAATATATAT AGATGGCACA GCATGGTGGC TAAGTATTTA
  AATAATAGTT TGTGTCCTCT ATAATTTGTT ATGTCAAATA TAGGTGTTGT TTTTACCTCA
  Y
  TATAGACAAT GCTTTGTTAG ACCTAAACTA TGTTTGGTGG TTTGGATAGT ATGGGCCACT
  TGATAGGTAT CTCATCACAC TGTAATTCAT ATTTTCATCT TTAAGAAAGC CCGATGGTAC
  ATAAGAAACT GATTTTCTTA TGTTGGTAAG TTTTGTTGGT TTGTTTTCAA TGTGGATTTG
  TTTGTAAGTT TGTGCTATGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	MOLF/EiJ	PWD/PhJ
ss60244879	NES15748735	PERLEGEN	MM_PANEL2	f	SNP	T	T	C
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	MOLF/EiJ	PWD/PhJ
rs50137774					SNP	T	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60244879	NES15748735	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:85848530 () rs orientation: forward

Symbol	Name	Function Class
1700007H22Rik	RIKEN cDNA 1700007H22 gene	1481 bp downstream