rs50140466 SNP Detail

Summary

• ID
  rs50140466
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:127931433 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATGAAGCATA CAGGTTAGGA CCAGTTTGAT TTTTCCATGC
  TCATAGTCAC AAGTGTGGTT GGTATCTTCA GCAATAGGGT CTTACTGTAG CTTCTGGAGT
  R
  TGACCTATAA TATTTGAGGT CTATGGGACC TCATGGAACA ACAACTCCAA AAATAAGTAA
  CCCATTCTTG GCACAAGACT TTTATTTATT AGACTATGT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147551123	ENSMUSSNP1670564	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs50140466					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:127931433 () rs orientation: forward

Symbol	Name	Function Class
Acoxl	acyl-Coenzyme A oxidase-like	Intron
Gm23101	predicted gene, 23101	411 bp upstream
Rr564642	regulatory region 564642	1065 bp distal
Rr564643	regulatory region 564643	1818 bp proximal