rs50145916 SNP Detail

Summary

• ID
  rs50145916
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:30528440 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAGCC ATGGTGTGAA TATGATAATA
  M
  TTTTGCACAC AATATGGCTG AATGA                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	MSM/Ms	SM/J
ss137553626	ENSMUSSNP3045364	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C		A
ss323988638	CHEV_12_31163306	CHEVERUD	SCREENING_POP	f	SNP				C		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	MSM/Ms	SM/J
rs50145916					SNP	C	C	C	C	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:30528440 () rs orientation: forward

Symbol	Name	Function Class
Gm28806	predicted gene 28806	761 bp downstream
Tssr113087	transcription start site region 113087	622 bp upstream