rs50155821 SNP Detail

Summary

• ID
  rs50155821
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:87703062 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGAAGTAGG AACCGTGCTA
  TCTGCTCAGC TGCCCCAGGT ATAATCATGA GAGGAGGAAG GAGACCAAGT CATGTGTGTG
  AGTGTGTGTG TGTGTGTGTG TGTGTGTGTG CGTGTGTGTT AGTTAGGGTT TCTATTGCTG
  CTGTGAACAA GCAGCTTGGG GAGGAGAGGA GTTTATTTGG CTTACATTTC CATCATTGAA
  G
  GATGTCAGGA CAGGAACTCA AGCAGGGCAG GAACCTGGAG GCAGGTGCTG ATGCAGAGGC
  CATGAAGGAA TGCTGCTTGC TGGCTTGCTC TCCATGGTCT GCTTTCTTAT AGAACCCAGG
  ACCACCTACC CAGGGCTGGC CTCACCCACT ATGTGCTGAG CCCTCCCACA CTGATCACTA
  ACTAAGAAAA CTCCCTCCAG                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss146179439	ENSMUSSNP4684051	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs50155821					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:87703062 () rs orientation: forward

Symbol	Name	Function Class
D17Mit130	DNA segment, Chr 17, Massachusetts Institute of Technology 130	1635 bp distal
Rr333853	regulatory region 333853	339 bp proximal
Rr343633	regulatory region 343633	252 bp proximal
Stpg4	sperm tail PG rich repeat containing 4	within coordinates