rs50167231 SNP Detail

Summary

• ID
  rs50167231
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:55206878 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TAGGA AGAAGAGTGG GCTTAATTGG
  G
  AGACGGGATG AGGGTATAAA GAGGA                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss139574357	ENSMUSSNP422901	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
ss324641234	CHEV_14_55588258	CHEVERUD	SCREENING_POP	f	SNP			G	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs50167231					SNP	G	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:55206878 () rs orientation: forward

Symbol	Name	Function Class
Mhrt	myosin heavy chain associated RNA transcript	within coordinates
Myh7	myosin, heavy polypeptide 7, cardiac muscle, beta	1263 bp downstream
Rr407057	regulatory region 407057	1638 bp distal
Rr492380	regulatory region 492380	616 bp distal
Rr492381	regulatory region 492381	240 bp proximal
Tssr125718	transcription start site region 125718	738 bp downstream
Tssr125719	transcription start site region 125719	646 bp downstream
Tssr125720	transcription start site region 125720	621 bp downstream
Tssr125721	transcription start site region 125721	609 bp downstream
Tssr125722	transcription start site region 125722	161 bp downstream
Tssr125723	transcription start site region 125723	119 bp downstream
Tssr125724	transcription start site region 125724	79 bp downstream
Tssr125725	transcription start site region 125725	746 bp upstream
Tssr125726	transcription start site region 125726	771 bp upstream
Tssr125727	transcription start site region 125727	804 bp upstream
Tssr125728	transcription start site region 125728	1612 bp upstream
Tssr128746	transcription start site region 128746	1446 bp upstream
Tssr128747	transcription start site region 128747	1422 bp upstream
Tssr128748	transcription start site region 128748	1378 bp upstream
Tssr128749	transcription start site region 128749	1347 bp upstream
Tssr128750	transcription start site region 128750	1325 bp upstream
Tssr128751	transcription start site region 128751	1319 bp upstream
Tssr128752	transcription start site region 128752	1260 bp upstream
Tssr128753	transcription start site region 128753	1061 bp upstream
Tssr128754	transcription start site region 128754	991 bp upstream
Tssr128755	transcription start site region 128755	1294 bp downstream
Tssr128756	transcription start site region 128756	1311 bp downstream