rs50183511 SNP Detail

Summary

• ID
  rs50183511
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:80818157 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A TCCTCTAGTT CCCTCGGGGG CTGATCTGAT AAGGACACAA
  AAATCTTAAC ACTGAGGAGT TTTGATGTCA GCTCGTGGTA GGCCTGACCT GCCTCTCACT
  S
  CTCAGCCCAA GGGTATCTTA CCCAGAGACC AAGAAAGTGC ATGCATATAA TTCAAGGCTA
  GCCTACACTT CATCCTGACA TAAAATGCTA AGTAGGTAGG C                    
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss135386108	ENSMUSSNP6406180	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs50183511					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:80818157 () rs orientation: forward

Symbol	Name	Function Class
Glrb	glycine receptor, beta subunit	within coordinates
Gm54207	predicted gene, 54207	1688 bp upstream
Rr578673	regulatory region 578673	1957 bp proximal