rs50184103 SNP Detail

Summary

• ID
  rs50184103
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:142453605 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGGAG CCCTCTATGC TTAAGCTCTG
  T
  GCGCGCGCGC GCACACACAC ACACA                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss136017220	ENSMUSSNP2794458	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
ss321003645	CHEV_3_142410808	CHEVERUD	SCREENING_POP	f	SNP			T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs50184103					SNP	T	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:142453605 () rs orientation: forward

Symbol	Name	Function Class
Gm15540	predicted gene 15540	within coordinates
Rr586479	regulatory region 586479	within coordinates
Rr586480	regulatory region 586480	375 bp proximal