rs50189148 SNP Detail

Summary

• ID
  rs50189148
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:36395469 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C ACCTCCACGG CGATCCAATG CTTCTAGCTT ATTTCAGCAT
  TCGTACTTAC ATTCATATAC CCATACACAG ATCCACCTAT CCAAATAATA AACGCAAATC
  R
  ATTTTAAAAA TCTTAGAAGG ATACAAACAC TAGATAACAG AAACTAAAGC TATTTTCTTT
  GCATATGACA AAATTATACA CATCAAAAAT TTAATAGAAT A                    
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss148872115	ENSMUSSNP3399646	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs50189148					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:36395469 () rs orientation: forward

Symbol	Name	Function Class
Fars2	phenylalanine-tRNA synthetase 2, mitochondrial	within coordinates
Gm40912	predicted gene, 40912	within coordinates
Rr279014	regulatory region 279014	1930 bp distal
Rr286029	regulatory region 286029	within coordinates