rs50191585 SNP Detail

Summary

• ID
  rs50191585
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:64832201 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCTATGTAA ATATGTTATT
  GGAGAAAACA AATATGAACT TTTATCTAAA AAAATGAAAC TAGATCTAAA TATTTACAGT
  GTCTGGGTGT CAAACCTTTT GACTTTGAGA TATGACAATG TGATCTAGAA ATATGTTTGT
  CTGCATTCAT GATTCTACTA GGACACATGC AGCTCACAGA CCACAAGCTG AAACATCACA
  Y
  TTAGACCTAT GAAATATTTT TCTTTTGTCA GTGAATTAAT GTTTTGTCCT ACAGCTAAGC
  TTTAAAATGG CAATATGGAT TGGCAAATAG AACTTGCTGA AAAATAATGT GATCTCATTC
  AAAACTTAAT ATTAAAACTC ATTATAATAT ATAGAAACAA CCTTATTTTT TAAGTATATG
  AATGCATGTA TACTAGCATT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss61635093	NES17583738	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	C	T	T	T	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs50191585					SNP	T	T	T	T	C	T	T	T	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61635093	NES17583738	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:64832201 () rs orientation: forward

Symbol	Name	Function Class
Dnajb6-ps	DnaJ heat shock protein family (Hsp40) member B6, pseudogene	884 bp upstream
Gm59451	predicted gene, 59451	738 bp downstream