rs50203705 SNP Detail

Summary

• ID
  rs50203705
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:98940762 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGGAGTTAGT CAACGCTGTG CAGGTTCCTC CCCTACTGCT
  CGAGTCAACA TCTGTCAGAA CTGGACATGT CTGCTTGAGG CGAGGTGAGG AAATCTCCCG
  M
  CTTATGCAAC TGGATTCTCT TCTTTAAAAG ATTATTTTAT GTGTATATGT GTGTGGGGGA
  TGGGTCTGTA CACATGCCCA TGGAGGCCAG AAAGGGCAT                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss148463636	ENSMUSSNP3020732	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A
ss325079663	CHEV_15_98873312	CHEVERUD	SCREENING_POP	f	SNP			C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs50203705					SNP	C	A	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:98940762 () rs orientation: forward

Symbol	Name	Function Class
Gm41399	predicted gene, 41399	within coordinates
Gm62755	predicted gene, 62755	within coordinates
Rr509292	regulatory region 509292	1583 bp distal
Rr509293	regulatory region 509293	164 bp distal
Rr509294	regulatory region 509294	1317 bp proximal
Rr509295	regulatory region 509295	1509 bp proximal
Rr509296	regulatory region 509296	1883 bp proximal