rs50210827 SNP Detail

Summary

• ID
  rs50210827
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:145531790 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T CTGCACGTCC AGCTAATCAG TCAGCCGTTG TACTTCTGAC
  ATAAGACTTA AACCTCATGT CCGGACACCT TCTGATGTCT TGAGACAGCA GTTTTCTTTA
  G
  CAGCTTAAAC ATTTCTATTT TGTTTTTTTC TCTTGCTGAT TCATATACAT TTAGAGTAGA
  AAGGACATAT GAATTAGGGT ATAGCTTTGA GTTCTCAGAC T                    
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss136040015	ENSMUSSNP4522459	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	A/J
rs50210827					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:145531790 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Ddah1	dimethylarginine dimethylaminohydrolase 1			Intron
				Noncoding-Transcript-Variant
Rr586848	regulatory region 586848			within coordinates
Rr586849	regulatory region 586849			1526 bp proximal
Tssr32303	transcription start site region 32303			1664 bp upstream