rs50233480 SNP Detail

Summary

• ID
  rs50233480
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:12729729 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CATCT GCCTCTGCTT AAGTGCTGGA
  R
  TTACAGGCAT TGGCTACCAT GCCCA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss148342398	ENSMUSSNP6109224	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	A
ss322107095	CHEV_7_13581151	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs50233480					SNP	A	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:12729729 () rs orientation: forward

Symbol	Name	Function Class
Slc27a5	solute carrier family 27 (fatty acid transporter), member 5	within coordinates
Tssr70630	transcription start site region 70630	1614 bp downstream
Tssr70631	transcription start site region 70631	1865 bp downstream