rs50234700 SNP Detail

Summary

• ID
  rs50234700
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:102839680 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTGGT GCCAGCACTT TAATTAACAG
  C
  CATCTTGGCC TGTGAGCCTG AGCCA                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss132740433	ENSMUSSNP620101	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs50234700					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:102839680 () rs orientation: forward

Symbol	Name	Function Class
Cpgi3944	CpG island 3944	1660 bp distal
Cpgi3945	CpG island 3945	within coordinates
Rr457458	regulatory region 457458	1676 bp distal
Rr457459	regulatory region 457459	1703 bp distal
Rr457460	regulatory region 457460	within coordinates