rs50241560 SNP Detail

Summary

• ID
  rs50241560
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:55204584 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGACA AAGTCATGAT GTCTAGGGAG
  A
  GCATCCAATT TGCAGGTGCA CGACT                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss139574316	ENSMUSSNP3240299	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A
ss324641219	CHEV_14_55585964	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs50241560					SNP	A	A	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:55204584 () rs orientation: forward

Symbol	Name	Function Class
Mhrt	myosin heavy chain associated RNA transcript	1631 bp upstream
Myh6	myosin, heavy polypeptide 6, cardiac muscle, alpha	200 bp upstream
Rr407057	regulatory region 407057	within coordinates
Rr492378	regulatory region 492378	533 bp distal
Rr492379	regulatory region 492379	within coordinates
Rr492380	regulatory region 492380	1108 bp proximal
Tssr4419	transcription start site region 4419	825 bp upstream
Tssr4420	transcription start site region 4420	712 bp upstream
Tssr4421	transcription start site region 4421	706 bp upstream
Tssr4422	transcription start site region 4422	654 bp upstream
Tssr4423	transcription start site region 4423	628 bp upstream
Tssr4424	transcription start site region 4424	590 bp upstream
Tssr4425	transcription start site region 4425	477 bp upstream
Tssr125718	transcription start site region 125718	1545 bp upstream
Tssr125719	transcription start site region 125719	1624 bp upstream
Tssr125720	transcription start site region 125720	1654 bp upstream
Tssr125721	transcription start site region 125721	1674 bp upstream
Tssr128732	transcription start site region 128732	1831 bp upstream
Tssr128733	transcription start site region 128733	1796 bp upstream
Tssr128734	transcription start site region 128734	1768 bp upstream
Tssr128735	transcription start site region 128735	1725 bp upstream
Tssr128736	transcription start site region 128736	1693 bp upstream
Tssr128737	transcription start site region 128737	1666 bp upstream
Tssr128738	transcription start site region 128738	1654 bp upstream
Tssr128739	transcription start site region 128739	1303 bp upstream
Tssr128740	transcription start site region 128740	1233 bp upstream
Tssr128741	transcription start site region 128741	1160 bp upstream
Tssr128742	transcription start site region 128742	542 bp upstream
Tssr128743	transcription start site region 128743	519 bp upstream
Tssr128744	transcription start site region 128744	190 bp upstream
Tssr128745	transcription start site region 128745	91 bp downstream
Tssr128746	transcription start site region 128746	825 bp downstream
Tssr128747	transcription start site region 128747	854 bp downstream
Tssr128748	transcription start site region 128748	873 bp downstream
Tssr128749	transcription start site region 128749	936 bp downstream
Tssr128750	transcription start site region 128750	955 bp downstream
Tssr128751	transcription start site region 128751	972 bp downstream
Tssr128752	transcription start site region 128752	1025 bp downstream
Tssr128753	transcription start site region 128753	1214 bp downstream
Tssr128754	transcription start site region 128754	1293 bp downstream