AGGTGGGTAC ATCCACCTTA AGTATGGGCC ACTCCTTCCT GTGGCAGCCA TATAAAGGGC TTTGAAGGAG GAGGCTTTTG TTCTTTGCCT GTGTGCCCTC CCTCTCACTG GCAAGTCTAA CCCTTCACTG GCGTCAGAGC CTACTTCTTC AGGATTCCTG TGTATACTGA AGACCAGCTT AGACATCCAG CCTCATAGAC Y GAATAACCGC TAGATTCTCG GACTTTCTGT TAGGATATGG CCAGTGCTGG ACTAGCCTAA GCATAGCCTG TAAGCCACTC TACTAAATCC CAAGTATGTG AGAACCCTGA CTTATGCAGG TAGTATTTCA CATTTAAACT ACAATACCTT CAGGATATGT ACTCACTCCT GAGCTTATTT CTATATTCAT TATCTCTATC Y = C/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129X1/SvJ |
A/J |
DBA/2J |
LG/J |
SM/J |
---|---|---|---|---|---|---|---|---|---|---|
ss135873356 | ENSMUSSNP3027455 | ENSEMBL | ENSEMBL_Sanger | f | SNP | C | C | T | ||
ss320957585 | CHEV_3_127563344 | CHEVERUD | SCREENING_POP | f | SNP | T | C | |||
SNP Consensus Information | ||||||||||
SNP | Consensus Type | 129X1/SvJ |
A/J |
DBA/2J |
LG/J |
SM/J |
||||
rs50248815 | SNP | C | C | T | T | C |
Location: Chr3:127654075 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Gm35585 | predicted gene, 35585 | within coordinates | ||||||
Rr584887 | regulatory region 584887 | 972 bp proximal | ||||||
Tssr31614 | transcription start site region 31614 | 1159 bp upstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/25/2025 MGI 6.24 |
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