rs50251706 SNP Detail

Summary

• ID
  rs50251706
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:185415607 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTTAGAACA AAACTCGTAG
  TTGGCCTAGG ACCAGCCAGA GTCAAGCTCC CGGGCCTCCC AGGTGGTGTG GCCAGTCACT
  CCTGAGAGGG TAGAAGAAGA CAGGGATGCC CTGGTGTTGG GATTCAGAGA TGTGCACTGA
  GGAGCTCTGC TTTCCCATTT ATTGTTTAAT CTCCCAGGCA TGTGTTTCTT CATTTGTAGG
  R
  TGGCAATTCT TATATTTGAG TTGTTTGAGG CTTAAGAAAA TGTATGAGGA ACGTTTATAA
  TCTAAGTGTG AAAACAACCC AAAGACAAAC CTCACCTTCC CAAGCATAGC TGCAAAATAC
  TGTCAAAAAT ATGTTCAGGA TTTCCCCAAG TGTGGTGGCT TTTGTTTGTA ATCCTAGCAT
  TTGGGGGCCT GAGGCAGGAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss146440030	ENSMUSSNP1211994	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
ss320178616	CHEV_1_187507289	CHEVERUD	SCREENING_POP	f	SNP			A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs50251706					SNP	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:185415607 () rs orientation: forward

Symbol	Name	Function Class
Rr425420	regulatory region 425420	850 bp distal
Rr425421	regulatory region 425421	1302 bp distal
Rr425422	regulatory region 425422	1388 bp proximal
Rr425423	regulatory region 425423	1576 bp proximal