rs50252962 SNP Detail

Summary

• ID
  rs50252962
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:154199243 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCGCTGGTGT TGTCTGCCAT TTTATTATTA TCCCCTGTAA
  GTATTGCCAA AGCTCTCGAT CTCTCAATGC CATTGTCTCA AACATTTGGA TCTTAATTTT
  Y
  AGGGGTGTTG TGTCAGAATG GAGACTGTCT CATCTTCCAC CTCGGCAACT GATGTGACAT
  AACATGTATA TAGCTTGCTG ATGGAAACTA GTTATCAGG                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss145760318	ENSMUSSNP2110993	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs50252962					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:154199243 () rs orientation: forward

Symbol	Name	Function Class
Gm18727	predicted gene, 18727	within coordinates