rs50255225 SNP Detail

Summary

• ID
  rs50255225
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:185320938 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATCTGGGCT CAGTGCAGGA
  CACCTCCCTC ATTTGATACA TGGAGTTTTA GCAACGAGGA AGCCTGCGGG AGGCTTAAGT
  GACATCTCCT CACACATGCA ATGATGATGA CGGGAACTGA TTATAACACA ATACAGTTGT
  CAAAATATTA AACGGACACA TTAGTGCTAA GTGCTAAGTA CTGAACATGT AAACCATGGT
  K
  CCTGGTGGTC ACAGATCCTT CTCAGGGAAT TTGCCCCAAC ACAGATCTTG CCAGGAGGAC
  AAGGATGGGC CTCACTGTAT CCTTTCATCT CCCAGGAAAA GTTGGATAAA AGCCAGGGAA
  GACCAAACCC CAAGGCTTTC CCTAAGCAAC TGAGATATTC TGGACAATCA GAAAAGAGCT
  GGCAACAACA GAATTAAAAA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss146437033	ENSMUSSNP3203060	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T	T
ss320177572	CHEV_1_187412620	CHEVERUD	SCREENING_POP	f	SNP				G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs50255225					SNP	G	T	T	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:185320938 () rs orientation: forward

Symbol	Name	Function Class
Rr425415	regulatory region 425415	24 bp distal