rs50259284 SNP Detail

Summary

• ID
  rs50259284
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:124019737 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATAATTTCA AGTGCATTTA
  CAAATGTGAA TAAAATCCGT AGTTAAGAGT CAAGAATGTC TCAATATTTA AACTCTTAAG
  AAAGTTTAGA GCTCATTTGC CTGTGATACA AATAGGATTC TAATAACTAC TACTACTAAC
  AAGAAAAAAG ACATAGTTTT AATAGACTAA AGCTTCAGCA ACTGAAGAGA TGACTCAGTG
  S
  TCAAGCAATT GTTCTTGCAT ACGATCCAGG TTCCTCCCCA GGCACCCACA AAGTGGTTCA
  CAACCATCTG TAGCTAAAGT TCCACGGGAT CAGGTGCCCT CTTCTGTCCA CTGTGGGCAC
  TGCACACATG CAGTGCACAG ACATACACGC AGGCAATGCT CGTATTACAC ATAGAATAAA
  ATAAACCTAA AATAGAAGAA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss135782589	ENSMUSSNP6214763	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G	C
ss320926406	CHEV_3_123929006	CHEVERUD	SCREENING_POP	f	SNP				C	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs50259284					SNP	C	G	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:124019737 () rs orientation: forward

Symbol	Name	Function Class
Rr584579	regulatory region 584579	91 bp proximal