rs50267989 SNP Detail

Summary

• ID
  rs50267989
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:70204833 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGCTAAATG ATTCTCTTGA
  TCTCAGTGTA CTCACCTGTA AAGTGGAAAT ACTTATAGTC CCTGCCTCAC ACTGTTTAAA
  TGATATGTAT ATATGTTATT TCAGGTAAAA TGCTTAAAGT AAAAACCCAC AGCACAGAGC
  TAGCTTTAAA CAGTTGGGAG CTATACTCTT ACTGCCATAG CTCCAAGACA AGTACCTCTC
  R
  TGTCACAAAT GCGGATGACA CCCAGGAAGG TGCTGTCTTG CACCAGGGGG GAGGAATTAC
  GAGGGTCCAA GAGCAGGCCT GGATAGCAAT TCCTTTACCT GTCAGTTCCC ATCAGCTCAT
  CAACAGGACA GGATGAAAGC CCTTAAACCT GGTCATGCCA AGGAGTGCGG AGATGCAGAC
  ATCACACACA GGATGCTCCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss139679392	ENSMUSSNP3511606	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs50267989					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:70204833 () rs orientation: forward

Symbol	Name	Function Class
Pebp4	phosphatidylethanolamine binding protein 4	within coordinates
Rr293348	regulatory region 293348	within coordinates
Rr293349	regulatory region 293349	968 bp proximal
Rr293350	regulatory region 293350	1568 bp proximal
Rr300152	regulatory region 300152	1034 bp distal
Rr389823	regulatory region 389823	736 bp downstream