rs50271553 SNP Detail

Summary

• ID
  rs50271553
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:14527777 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTGTGAGGC AGGAGCCTGA
  GTCTATAACA GAACTCGAGA GTCAAGAGTG TTTCCCAAAG GGCTGATTAG GGAGACACAA
  AGTAAGGCTA GCTGGCCTTA AAATCTGTGT GTTAGCTGCC AGGCTCCCAG CAGAATGGTG
  TCTTTAAATG ATTCAGCGCT GCCCAGCTCA GGTTGCTTGC AATGCTGTGT CCCCACTCAC
  A
  CCACACTGCT TAGCATCCAC GTTTACCATG TGCATCTTCT CCTTCCAGAT AAGTATGCCG
  TTCGCTTCAT CCCGCATGAG AATGGCATCC ACACGATCGA TGTCAAGTTT AACGGGAGCC
  ACGTGGTCGG GAGCCCTTTC AAAGTACGTG TAGGAGAGCC TGGCCAGGCA GGCAATCCTG
  CTCTAGTGTC AGCCTACGGT                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss138984431	ENSMUSSNP5793575	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs50271553					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:14527777 () rs orientation: forward

Symbol	Name	Function Class
Flnb	filamin, beta	within coordinates
Gm62553	predicted gene, 62553	within coordinates
Rr487922	regulatory region 487922	1148 bp distal
Rr487923	regulatory region 487923	201 bp proximal
Tssr124220	transcription start site region 124220	337 bp downstream