TCTCATTCTC TACTTTAGAC AGCTTTCCCG AGTCAACGGC TTCGTGAATG GGGCACAAAT TAGAAGCCCA GTAAGAGCTT GTTGGGGGAA AAAAAAAAAA AAAAAAAAAA AAAGAAAAAC AAAACAAATC TTAGTTCTGC ATGAAATGGG ATGATAGTAC ATCCCTTAAA ATTGTATGGT TCGGATATAA AAGACCACAC R TGAAATATTT TCCTGGCTCT CTTTGAACTA TGCAATTTAG AGGCCCTAAC TGATCTCGAA GCTCTGAAGC ACACACACGC TTGCACGCAC ACACATATAT GTTAGCACAT GGCCACATAT TTCTAAGTGA CAAAGCAGGG ATTCAAATTC ATGTCTGCGA CACATGGTAA TGGTGGCCTT CCAAGAAGGC AGTGCACCAC R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129X1/SvJ |
A/J |
DBA/2J |
---|---|---|---|---|---|---|---|---|
ss147559905 | ENSMUSSNP6986921 | ENSEMBL | ENSEMBL_Sanger | f | SNP | A | G | G |
SNP Consensus Information | ||||||||
SNP | Consensus Type | 129X1/SvJ |
A/J |
DBA/2J |
||||
rs50275868 | SNP | A | G | G |
Location: Chr4:135874744 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Cpgi15099 | CpG island 15099 | 100 bp proximal | ||||||
Gm68296 | predicted gene, 68296 | within coordinates | ||||||
Rr377254 | regulatory region 377254 | within coordinates | ||||||
Rr602286 | regulatory region 602286 | 1900 bp distal | ||||||
Rr602287 | regulatory region 602287 | 236 bp distal | ||||||
Rr602288 | regulatory region 602288 | within coordinates | ||||||
Tssr39669 | transcription start site region 39669 | 185 bp downstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 07/22/2025 MGI 6.24 |
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