rs50276306 SNP Detail

Summary

• ID
  rs50276306
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:95182142 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCATAATGAG ATCTGGTGCC
  CTCTTCTGGG GTATCTGAAG ACAGCGACAG TGAGCAGGGC TAGAGTGAGA GCTAGAGAGT
  TGGCTCAACA GTTAAGAGCA CTGACTGATC TTCCGAAGGT CCTGAGTTCA AATCCACACG
  GTGGCTCACA ACCATCTGAA ATGAGATTGG ATGCTCTCTT CTGGTGTGTC TGAAGACAGC
  K
  ACAGTGTACT TACATACAAT AAATAAATAA ATCTCTCTTT TTTTTTGTTT CTTTGAGACA
  GGGTTTCTCT GTGTAGCTCT GGCTGTCCTG GAACTCACTC TGTAGACCAG GCTGGCCTCG
  AACTCAGAAA TCCGCCTGCC TCTGCCTCCC AAGTGCTGGG ATTAAAGGTG TGCACCACCA
  CGCCCGGCTC GCTCTCTTTT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss135510416	ENSMUSSNP3453057	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs50276306					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:95182142 () rs orientation: forward

Symbol	Name	Function Class
Prune1	prune exopolyphosphatase	Intron
Rr580881	regulatory region 580881	1074 bp distal
Rr580882	regulatory region 580882	626 bp distal
Rr580883	regulatory region 580883	167 bp distal