rs50279144 SNP Detail

Summary

• ID
  rs50279144
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:59790769 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCCAAAACAC AGGCTAAGAT CTACTTGTAG ATCTAAAGAA
  TAGGGTCTCC CATCTGACAC ACCTTACCAA CCAATGATAG ATAGTCTGCT TACAGCAGTT
  S
  CTTTTACCCG CCATGTCCTA TCTCATGGCC AAGATAAGGG CATCCTGTGA GGCAGAAACC
  AATCTGGAGA CAGAAAGGCA ATATCAGGAC CAGCCACAC                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss149079826	ENSMUSSNP2365469	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	G
ss324357495	CHEV_13_59744316	CHEVERUD	SCREENING_POP	f	SNP				G	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs50279144					SNP	C	C	G	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:59790769 () rs orientation: forward

Symbol	Name	Function Class
Golm1	golgi membrane protein 1	within coordinates