rs50303005 SNP Detail

Summary

• ID
  rs50303005
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:53879366 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G CAGTTGACTA TAAATCCTTT TTGGAAGAAA ATGTAGGTTA
  TATAAAAATG GCTGAAATGG GACTCGCACT AAAGAAGTGT GAGGACCTCT GACTTTGCTG
  G
  GGGTTAGACT CCTGGAAGAT CTACCTGGGA GGGTTTGGGG GCAACAGAGG CCAGCAAACA
  TAGCAAGGAC TCCGGAGGCC CCTGGTTTTT TTTAATATAA C                    
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ
ss146322669	ENSMUSSNP1041379	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ
rs50303005					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:53879366 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14308	CpG island 14308	304 bp distal
Gm12468	predicted gene 12468	1038 bp downstream
Gm68624	predicted gene, 68624	within coordinates
Rr592320	regulatory region 592320	239 bp distal