rs50303446 SNP Detail

Summary

• ID
  rs50303446
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:153472370 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGAACCTGCC AGAGAGCTGC CCTCAATAAA TCCGCCTTTG
  TACTTTTTAT TTTATGTGTG TGAGTACCCT GTAGCTGTCT TCAGACACAC CAGAAGAGGG
  T
  GTCGGATCTC ATTACAGATG GTTGTGAGCC ACCACGTGGT TGTTGGGAAT TGAACTCAGG
  ATCTCTGGAA GAGCAGTCAG TGCTTTTAAC CACTGAACC                       
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss147999391	ENSMUSSNP2818015	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs50303446					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:153472370 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Commd7	COMM domain containing 7			Intron
				Noncoding-Transcript-Variant
Cpgi12491	CpG island 12491			1848 bp proximal
Rr567709	regulatory region 567709			within coordinates