rs50305463 SNP Detail

Summary

• ID
  rs50305463
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:46873562 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTAACTAAA GTGATTTAGT
  TTTCCTTTTC TCAAGTTCCT TGAAGTTTTA TTCTGATAAT ATGCAAGTGG GGAAAGGGAA
  GGGTTGGTTC ATAAGCCACC CAGTTAGCTT TCATAAACAG CCCCAGAAAC CTGTGGATAA
  CCCTCAGATG CTCTGGCCCC TCCCATTATG ACCCTAGGAG CCAGAGTACT CCTGCATTCT
  W
  ACTCTGCTCA CAGTGGTGTA GAAGTGGGTT TGAATTACTT GCAGCATCTC CATCCCACCA
  TAGTACAGCC TTGTCTTTAT AAATCTTCCA AGGAGCTTCC CACCACCACC CTTGTCGTTT
  TGGCCACTGC CTCATCTTTC CTGTCCCTGC TCCTTGTCTA CCATAGCAAC TGCAATTGCA
  TGTCAGTTAG TTACCAAACA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss61389683	NES16770279	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	T	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs50305463					SNP	A	A	A	A	A	A	T	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61389683	NES16770279	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:46873562 () rs orientation: forward

Symbol	Name	Function Class
Gm47153	predicted gene, 47153	within coordinates