rs50305541 SNP Detail

Summary

• ID
  rs50305541
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:146288367 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACTAAAGTCA ACTTGGAGGA GAAGGGCGTT ATTTGGTTCA
  CAGGTTACAG TTCACCATGC AGGGAAGCCA GGGCAGGAAC CTGGAGGCAG GAACTGAGAC
  A
  GAGCTCATGG AGGAGAACTG CCTATAGTTT ATTTCACTGT TCATGTTCAG CTACCTTTCC
  TATACAGCTT AGGCCCACCT GCCTAGGGAA CTGTACAAC                       
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss144648178	ENSMUSSNP5643036	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs50305541					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:146288367 () rs orientation: forward

Symbol	Name	Function Class
Gm38747	predicted gene, 38747	1976 bp upstream