rs50306818 SNP Detail

Summary

• ID
  rs50306818
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:47121967 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCCTG AAGCTACGAG AAAAGGGGAA
  A
  GAGCGATCTT CATTCAGTTT TGTGC                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss139393600	ENSMUSSNP7015348	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A
ss324592435	CHEV_14_47504185	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs50306818					SNP	A	A	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:47121967 () rs orientation: forward

Symbol	Name	Function Class
2810457G06Rik	RIKEN cDNA 2810457G06 gene	within coordinates
Cpgi6376	CpG island 6376	within coordinates
Gm34934	predicted gene, 34934	1792 bp upstream
Rr297079	regulatory region 297079	within coordinates
Samd4	sterile alpha motif domain containing 4	within coordinates
Tssr4382	transcription start site region 4382	460 bp downstream
Tssr125240	transcription start site region 125240	1574 bp downstream
Tssr125241	transcription start site region 125241	1537 bp downstream
Tssr125242	transcription start site region 125242	1511 bp downstream
Tssr125243	transcription start site region 125243	66 bp upstream
Tssr128301	transcription start site region 128301	477 bp downstream