rs50308637 SNP Detail

Summary

• ID
  rs50308637
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:107092830 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACGGGGTTG GGTGGTGCTG
  GCACTCACCT CGAACCCCAG CATTCAGATG TCAGAGACAG GCAGATCTCC CAGGTGGAGG
  CCAGCCTGGT CTATAGATCG AGTCCCAGGA CAGCCAGAGC CACACAGAAA GTATCCAGTG
  GAACTCTGAG TTACAGGCAT CACTTAAGGG CCTGACTAGG AAAAGCTCCC ACCAGGCCTC
  R
  AAAGACAGAA GCAAAAACCA CAGCCATGGT CTTGAGCTCT AACCACCACC CCCAACCCCC
  GCCCCGCCAC TATCAAGCAG AAGCAACATG GTCCCAAATG AATCGGTCAC TCTCAGTGAG
  GAATGGAATC CCAGGGGAGA CATTTCTTCT TCAATGGCTA CAAGCCATTT TTTTTTCCTG
  TCTGCCAGGT TACACAGGGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss61696994	NES17648992	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	A	A	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs50308637					SNP	G	G	G	G	G	G	G	G	G	A	A	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61696994	NES17648992	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:107092830 () rs orientation: forward

Symbol	Name	Function Class
Gm16084	predicted gene 16084	within coordinates
Rr369596	regulatory region 369596	1957 bp downstream
Rr369597	regulatory region 369597	204 bp downstream