rs50310861 SNP Detail

Summary

• ID
  rs50310861
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:20772929 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAGGGATCG AATTTCTTCC
  TAATCATTCA AACCGCAGGA AAGAACACAA AGCCTTGCTG CTGTGTATGT TCTGTACAAA
  AACTGTTTTT AGAGATATGT TAAGAACCCA TTGTCAAAAG CCAAAGAACT TGAAATTAGC
  CTAGGATGTG GAGGCAGGAC TAAAATTTTG AGGTTAGCTT GAACTACACA GAAACATCTG
  R
  ACAGTGGTGG GGGGAGGGGG AAGGAGAAGG TAGGGAGATG AACTGCATCC TAAAGGAGAG
  TGGATAAAAT ATGCCACTGT ATAATATATA TATATATACC CTTACAGTGG AACACTGCTC
  ATCAATGTAA GGGGAAACAG TTGAAGCAGT ACGAATGTAG CTAAACACTT GCAAAATCAA
  AGACGCCAAC TCTAAGACAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	MSM/Ms
ss131781659	ENSMUSSNP356527	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	MSM/Ms
rs50310861					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:20772929 () rs orientation: forward

Symbol	Name	Function Class
Gm32213	predicted gene, 32213	1767 bp downstream
Lgalsl	galectin like	647 bp downstream
Rr443482	regulatory region 443482	440 bp proximal