rs50314131 SNP Detail

Summary

• ID
  rs50314131
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:151997112 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCACACTCA TATGTGCATT
  CCCACACTTC ATTAAAAATA ACATCTTTGG CCAGGCGGTG GTGGCGCACG CCTTTAATCC
  CAGCACTTGG GAGGCAGAGA CAGGCGGATT TCTGAGTTCG AGGCCAGCCT GGTCTACAGA
  GTAAGTTCCA GGACAGTCAG GGCTACACAG AGAAACCCTG TCTGGAAAAA CCAAAACCAA
  M
  CAAACAAAAA AACATCTTTT GCAAATAATT CAGTTGTTAA ATCCAACTAC TTAATCTACC
  AGGTGTGCAA AAATGTAGAG TAACCGAGGA GGGTTTTACT ATCCAAAGGA CACTTCAAAC
  TCATGAGGCA AACTGTAAAA ATGTGCAAAC ACATACTACG TGCTGTCCTA AGAACCTGTC
  TTCTCTGGGG CTTTGATTAG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss136101831	ENSMUSSNP4639828	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs50314131					SNP	C	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:151997112 () rs orientation: forward

Symbol	Name	Function Class
Miga1	mitoguardin 1	within coordinates
Tssr32405	transcription start site region 32405	1144 bp downstream