rs50314644 SNP Detail

Summary

• ID
  rs50314644
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:114158570 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C CAAATTAGTG CTAGGGAGCT GGAAGATCCC TGGATTGTCT
  CTGAGACACT CACAACCACA GCAGAGAGCA GACACAAAGC ACAGGAGCAG CCCAGGACAC
  G
  CATGCCCTGA AGGAGGCTCC TATGATAGCT TGTTAGCCAG GACTCGGCCT TCAGCCTTGT
  ACTGTGGGTT ATTTTTTGCA TAGAGGGCGC TCCTGAGGAA G                    
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss138771768	ENSMUSSNP4323816	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs50314644					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:114158570 () rs orientation: forward

Symbol	Name	Function Class
Igh	immunoglobulin heavy chain complex	within coordinates
Ighv3-3	immunoglobulin heavy variable V3-3	1489 bp downstream
Tssr118065	transcription start site region 118065	1974 bp downstream