rs50317597 SNP Detail

Summary

• ID
  rs50317597
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:91907183 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CATCT GAAGAAGGGA AGGGTAAAGG
  A
  GGGGGAGAGA AAGGGACAAG AGGAG                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	LG/J	SM/J
ss147299122	ENSMUSSNP958660	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
ss323389575	CHEV_10_91534066	CHEVERUD	SCREENING_POP	f	SNP		A	A
SNP Consensus Information
SNP					Consensus Type	A/J	LG/J	SM/J
rs50317597					SNP	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:91907183 () rs orientation: forward

Symbol	Name	Function Class
D10Mit176	DNA segment, Chr 10, Massachusetts Institute of Technology 176	1773 bp distal
Gm55043	predicted gene, 55043	340 bp downstream
Mir135a-2	microRNA 135a-2	765 bp downstream
Tssr98922	transcription start site region 98922	777 bp downstream