rs50320124 SNP Detail

Summary

• ID
  rs50320124
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:65252048 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTTACATTC TTTCATGTGC
  CCTATACTTT TGAGGACAAC CTTTAAATGG TCCCCTTTCC TGTAGTTTTC TTCCAAGTTA
  GTTATTGATC CTATTGTACA TAGAAGTTAT CTGTTTGAAG GACACCTTTA TTCAAGGTCC
  TAATCTTGCA CAAAGAACTT GGAAAGATAC CCCATTGCCA GTTAGATAAT GCCAGGCATC
  M
  ATCCAGGTCC TTTACACTGA CCTGCCATTC TCTCTGTGGT GGCCGCCATG ACTCTCAGTC
  TTCTCTAGAT CTTGCCATCT GGGAGGAGAC ACACTGTTAT CAACCTCATC TCTATTTCAC
  AGAAAGATGA AACAGAGCTC AGCGAGATTA ATAAGCTCAT TCCAGGTAAG CAAGCCAAGC
  TGGTCTGTAA ACTCAAATGG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss62843411	NES17378512	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	A	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs50320124					SNP	C	C	C	C	C	C	A	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss62843411	NES17378512	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:65252048 () rs orientation: forward

Symbol	Name	Function Class
Gm25344	predicted gene, 25344	201 bp upstream