rs50323059 SNP Detail

Summary

• ID
  rs50323059
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:121807488 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCACTGAAG CCAGACAAGA
  AGACAGCCAA GTTAGGAGAG CAGATTCCAC AGATAGGCAT CAGCTTTTGG GATAGCCCCT
  GTACCCATTG TTCACGACCC ACATGAAGAC CAAGCTGCAC ATCTGCTACA TAAGAGCAGG
  GAAGGGGGGC GGGTGACCTT TTTGACCTAG AAAACATTTG TTCATGGGGA ACATATTTTT
  W
  AAAACATTAT TAGACAAGCA GGTTTTGTAT TTTGTTTTTA ACTCATTTGT AAAATATTTG
  TGGTTGAGGT TTCTTTTGCA TAGATTTATG CAAAAATTAA ATGAACTTTT AAATTCCAAC
  TGTATCTTTA AAGAACAGCT AGATCTTCTG CATAGACAGT ACTGTGTTGG GGACATTTAT
  AGTATTCCTC CTGTTGTCCA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss135733489	ENSMUSSNP2467116	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs50323059					SNP	T	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:121807488 () rs orientation: forward

Symbol	Name	Function Class
Arhgap29	Rho GTPase activating protein 29	Intron
Rr584215	regulatory region 584215	739 bp distal