rs50325806 SNP Detail

Summary

• ID
  rs50325806
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:133576251 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCAAAGGAAC TTACCTTGTC
  AACGTGATTG GCGATCTCTA TTAATCGCTG CTTAACTTTC TCCAGGTCTT TTCCTTGCCT
  CTGAAACTTA ACAATTTTAA ATGCTAGCAT TAATAATGGT AAGAATATCA ATCAGGATTC
  CTCCTCCCAG ACCCTGAGCT TTGGTGATAC CCTGTACCCT TGGGGGCCTT CAGTACAGTA
  Y
  AAGGGGCTCC CATTGTGCCA GGTAGTTTCC CCAGCTGGGG AGTCCCTGCA GTTCCGTACA
  ACTGGCTCAA GCCAAGGGCT CAGAGGACAG TGACTTTTGC AATTCTTCCA ACTTCATAAA
  TGATGGAGGA AGAGACATGT TTTGGCAATG ATATAATGGA CAATGGGAAG ACTCTCCAAA
  GCCACTTTTC ATATCATCAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	MSM/Ms
ss145939617	ENSMUSSNP2542852	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	MSM/Ms
rs50325806					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:133576251 () rs orientation: forward

Symbol	Name	Function Class
5033415L01Rik	RIKEN cDNA 5033415L01 gene	1556 bp downstream
Adam12	ADAM metallopeptidase domain 12	within coordinates