rs50332451 SNP Detail

Summary

• ID
  rs50332451
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:54690048 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGATGGAGGT GAGATGACCA
  AGGCAGGAGA CCATGGTGCC TTATAAGTCA TTATAAAGAT TTTGGCTTGA CTGTGTTTGG
  TTTGGTTGTT TGGTAGGTGG TGGTGTCTTG TTCTGTTGAT ACAGGGTCTT GGGTAGCCAA
  GGCTGGCCTT GAATTTACTT TGTAACTGAG GGTGACTTTG AACTCCTATT CTTCCTGCCC
  Y
  GGACTCCTAA GTGCTAGAAT CATAGGCATG AACCATGATG TCTGACAAAA GCTTAGGCTC
  CCATTCTGAC TAAAAAGAGC CTTTGAAGTG CAGGAAAGAA AGAAAGGTTA TTTTAGCACA
  TTGCAAACAG TATTATTAGT CCGGTCAGGA GAACAATTAC CACTGTTATA TAATGCTTTC
  TGTAAGCCAA GACACTTAAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss139563055	ENSMUSSNP4586995	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
ss324637288	CHEV_14_55071428	CHEVERUD	SCREENING_POP	f	SNP			T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs50332451					SNP	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:54690048 () rs orientation: forward

Symbol	Name	Function Class
Rr299430	regulatory region 299430	1954 bp proximal
Rr389675	regulatory region 389675	within coordinates