rs50335548 SNP Detail

Summary

• ID
  rs50335548
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:72156559 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CGGGGCGTCC TTTCCCCGTT
  CTCTCACTTC CTCGGATCCA GGGTCCGTGG AAGGGCCTTT TTTCTTAGGT ATACCCTTTT
  TTCTTTGAGT TCCTAATCTT TTACCCCGCT CTGTTTCTGA CATGCTGTCT TGAACCTCCT
  CCAGCACTCC CTGTCCTGCT TTCACTATAA GGAAAAGGAT AAGTGCCGCA AGAACAATTA
  C
  GAAGGCTTCC ACTGCCCCTT CTAGTTGTGG AGAAAGACCA GAACCAAACA TGCCTCTCAG
  AGCTTACCTG GAAAAACTTA ACCCGGCTGC AGTTCTGAAT CCGCTCCGCG AACATAGGGT
  CTCCTCGGCG CCGGAGATGG TAAGGCGTTC CCGGGTTTTG GCGCCACTTG TTCCGCGTGC
  TATCATCTCG CCAGCAAGAA                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ
ss136619919	ENSMUSSNP6800119	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ
rs50335548					SNP	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:72156559 () rs orientation: forward

Symbol	Name	Function Class
Rr383575	regulatory region 383575	1330 bp upstream